Publications Nahri Moreano

Publications

L. Feuser and N. Moreano,
"Parallel Solutions to the k-difference Primer Problem",
Proceedings of the International Conference on Computational Science (ICCS), pp. 506-523, 2018.

N. Moreano and A. C. M. A. Melo,
"Biological Sequence Analysis on GPU",
book chapter 6, H. Sarbazi-Azad. (Org.), Advances in GPU Research and Practice, pp. 127-162, Elsevier, 2017.

A. Araújo Neto and N. Moreano,
"Acceleration of Single- and Multiple-Segment Viterbi Algorithms for Biological Sequence-Profile Comparison on GPU",
Proceedings of the 21st International Conference on Parallel and Distributed Processing Techniques and Applications (PDPTA), pp. 65-71, 2015.

A. Nolasco and N. Moreano,
"Parallel Exact Spliced Alignment on GPU",
Proceedings of the 20th IEEE International Conference on Parallel and Distributed Systems (ICPADS), pp. 426-435, 2014. (.pdf)

E. R. Amorim, R. L. Aquino, and N. Moreano,
"Aceleração da Busca em Largura em Grafos de Larga Escala utilizando CUDA",
Escola Regional de Informática do MS (ERI-MS), 2014. (.pdf)

S. Ferraz and N. Moreano,
"Evaluating Optimization Strategies for HMMer Acceleration on GPU",
Proceedings of the 19th IEEE International Conference on Parallel and Distributed Systems (ICPADS), pp. 59-68, 2013. (.pdf)

S. Ferraz and N. Moreano (orientadora),
"Estratégias de Otimização em GPU para Análise de Sequências Biológicas",
Anais do XIV Simpósio em Sistemas Computacionais - Concurso de Teses e Dissertações (WSCAD-SSC / CTD), 2013,
1o. Lugar na Categoria Dissertação de Mestrado.

J. F. Eusse Giraldo, N. Moreano, A. C. M. A. Melo, and R. P. Jacobi,
"A Protein Sequence Analysis Hardware Accelerator Based on Divergences",
International Journal of Reconfigurable Computing (Print), vol. 2012, id. 201378, 2012. (.pdf)

A. C. M. A. Melo and N. Moreano,
"FPGA-Based Accelerators for Bioinformatics Applications",
book chapter 12, M. Khalgui and H. Hanisch. (Org.), Reconfigurable Embedded Control Systems, pp. 311-341, IGI Global, 2011. (.pdf)

J. F. Eusse Giraldo, N. Moreano, R. P. Jacobi, and A. C. M. A. Melo,
"A HMMER Hardware Accelerator Using Divergences",
Proceedings of the Design, Automation & Test in Europe Conference & Exhibition (DATE), pp. 405, 2010. (.pdf)

A. Idalgo and N. Moreano,
"DNA Physical Mapping on a Reconfigurable Platform",
Proceedings of the International Workshop on Applied Reconfigurable Computing (ARC),
Lecture Notes on Computer Science - Reconfigurable Computing: Architectures, Tools and Applications, volume 4943, pp. 27-38, 2008. (.pdf)

C. Souza , A. Lima , G. Araujo, and N. Moreano
"The Datapath Merging Problem in Reconfigurable Systems: Complexity, Dual Bounds and Heuristic Evaluation",
ACM Journal on Experimental Algorithms (JEA), volume 10, pp. 2.11, 2005. (.pdf)

N. Moreano, E. Borin, C. Souza, and G. Araujo,
"Efficient Datapath Merging for Partially Reconfigurable Architectures",
IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems (TCAD), volume 24, issue 7, pp. 969-980, July 2005. (.pdf)

N. Moreano,
"Algoritmos para Alocação de Recursos em Arquiteturas Reconfiguráveis",
Tese de Doutorado, Instituto de Computação - Unicamp, November 2005.
1o. Lugar na Categoria Tese de Doutorado do Concurso de Teses e Dissertações do Congresso da Sociedade Brasileira de Computação (CTD/CSBC), 2006.
Prêmio CAPES de Tese (área Ciência da Computação), 2006.

E. Borin, F. Klein, N. Moreano, R. Azevedo, and G. Araujo,
"Fast Instruction Set Customization",
Proceedings of the 2nd Workshop on Embedded Systems for Real-Time Multimedia (ESTIMedia), pp. 53-58, September 2004. (.pdf)

Z. Huang, S. Malik, N. Moreano, and G. Araujo,
"The Design of Dynamically Reconfigurable Datapath Coprocessors",
ACM Transactions on Embedded Computing Systems (TECS), volume 3, issue 2, pp. 361-384, May 2004. (.pdf)

C. Souza , A. Lima , N. Moreano, and G. Araujo,
"The Datapath Merging Problem in Reconfigurable Systems: Lower Bounds and Heuristic Evaluation",
Proceedings of the Third International Workshop on Experimental and Efficient Algorithms (WEA),
Lecture Notes in Computer Science, volume 3059, pp. 545-558, May 2004. (.pdf)

N. Moreano, G. Araujo, and C. C. de Souza,
"CDFG Merging for Reconfigurable Architectures",
Technical Report IC-03-18, Institute of Computing - UNICAMP, October 2003. (.pdf)

N. Moreano, G. Araujo, Z. Huang, and S. Malik,
"Datapath Merging and Interconnection Sharing for Reconfigurable Architectures",
Proceedings of the 15th International Symposium on System Synthesis (ISSS), pp. 38-43, October 2002. (.pdf)